Schema for mrnaOrientInfo
  Database: tarSyr1    Primary Table: mrnaOrientInfo    Row Count: 0   Data last updated: 2016-08-29
Format description: Extra information on ESTs - calculated by polyInfo program
On download server: MariaDB table dump directory
fieldSQL type info description
bin smallint(5) unsigned range Indexing field to speed chromosome range queries.
chrom varchar(255) values Reference sequence chromosome or scaffold
chromStart int(10) unsigned range Start position in chromosome
chromEnd int(10) unsigned range End position in chromosome
name varchar(255) values Accession of EST
intronOrientation smallint(6) range Orientation of introns with respect to EST
sizePolyA smallint(6) range Number of trailing A's
revSizePolyA smallint(6) range Number of trailing A's on reverse strand
signalPos smallint(6) range Position of start of polyA signal relative to end of EST or 0 if no signal
revSignalPos smallint(6) range PolyA signal position on reverse strand if any

Connected Tables and Joining Fields
        hgFixed.gbCdnaInfo.acc (via mrnaOrientInfo.name)
      hgFixed.gbSeq.acc (via mrnaOrientInfo.name)
      hgFixed.imageClone.acc (via mrnaOrientInfo.name)
      hgFixed.refLink.mrnaAcc (via mrnaOrientInfo.name)
      hgFixed.refSeqStatus.mrnaAcc (via mrnaOrientInfo.name)
      hgFixed.refSeqSummary.mrnaAcc (via mrnaOrientInfo.name)
      knownGeneV39.kgXref.refseq (via mrnaOrientInfo.name)
      knownGeneV39.knownToRefSeq.value (via mrnaOrientInfo.name)
      tarSyr1.all_mrna.qName (via mrnaOrientInfo.name)

Sample Rows
 
binchromchromStartchromEndnameintronOrientationsizePolyArevSizePolyAsignalPosrevSignalPos

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.