Splice Junctions HeS3 cyt pA+ J Track Settings
 
HeLa-S3 cytosol polyA+ RNA-seq Junctions Pooled from ENCODE/CSHL

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Metadata:

Principal Investigator on grant:Gingeras
Lab producing data:Gingeras - CSHL
Experiment (Assay) type:RNA-seq
View - Peaks or Signals:Junctions
Cell, tissue or DNA sample:HeLa-S3
Cellular compartment:cytosol
RNA Extract:Long PolyA+ RNA
Paired/Single reads lengths:2x76D
ENCODE Data Freeze:ENCODE Jan 2011 Freeze
UCSC Accession:wgEncodeEH000171
Date submitted to UCSC:2011-02-18
Date restrictions end:2011-11-18
Submission ID:3632
GEO sample accession:GSM765404
Lab provided identifier:LID8469,LID8470
Cross Lab Bio-Replicate ID:011C,012C
Spike-In Pool:Nist14
Lab specific details:iIDR
Sequencing Platform:Illumina Genome Analyzer IIx
tableName:wgEncodeCshlLongRnaSeqHelas3CytosolPapJunctions
File Name for downloading:wgEncodeCshlLongRnaSeqHelas3CytosolPapJunctions.bedRnaElements.gz
Data schema/format description and download
Source data version: ENCODE Jan 2011 Freeze
Assembly: Human Feb. 2009 (GRCh37/hg19)
Data last updated at UCSC: 2011-03-23