Reg. ChIP-chip Track Settings
 
ChIP-chip Results from Harbison Gordon et al.   (All Expression and Regulation tracks)

Display mode:      Duplicate track
Data schema/format description and download
Assembly: S. cerevisiae Apr. 2011 (SacCer_Apr2011/sacCer3)
Data last updated at UCSC: 2011-08-31

Description

This track shows the location of the probes spotted on a slide in the chromatin immunoprecipitation/microarray hybridization (ChIP-chip) experiments described in Harbison, Gordon et al. below. Click on an item in this track to display a page showing which transcription factors pulled down DNA that is enriched for this probe sequence, which transcription factor binding site motifs are present in the probe and whether these motifs are conserved in related yeast species. See also the "Regulatory Code" track for the position of the individual motifs.

Credits

The data for this track was provided by the Young and Fraenkel labs at MIT/Whitehead/Broad. The track was created by Jim Kent.

References

Harbison CT, Gordon DB, Lee TI, Rinaldi NJ, MacIsaac KD, Danford TW, Hannett NM, Tagne JB, Reynolds DB, Yoo J et al. Transcriptional regulatory code of a eukaryotic genome. Nature. 2004 Sep 2;431(7004):99-104. PMID: 15343339; PMC: PMC3006441

Supplementary data at http://younglab.wi.mit.edu/regulatory_code/ and http://fraenkel.mit.edu/Harbison/.