Runx3WT_6h_rep2 Track Settings
 
Exp169_WT_6h_rep2

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Assembly: Mouse Dec. 2011 (GRCm38/mm10)
Data last updated at UCSC: 2024-03-28 12:58:11

T cell ATACseq & ChIPseq Tracks

T cell ATACseq & ChIPseq Tracks

Maintained by: Pipkin Lab; Contact: mpipkin@scripps.edu ; Github: ScrippsPipkinLab


ATACseq of murine CD8 T cells

  • In vitro TCR stimulation time points: 0, 2, 6, 12, 24 hours. WT and Runx3KO P14 cells. Link to article GSE111149
  • In vitro cultured CD8 T cells at high(100U) / low(10U) IL-2 levels, with different combinations of PMA/Iono/CsA stimulation Link to article GSE88987
  • In vivo sorted CD8 T cells phenotypes: Naive, MPEC, SLEC, Memory,Exhausted Link to article GSE88987

Reference ChIPseq of key transcription factors

  • Bach2
  • BATF
  • cJun
  • IRF4
  • JunB
  • JunD
  • Runx3 day6 (d6)
  • Runx3 ex vivo
  • Stat5a
  • Stat5b
  • Tbet
  • Tcf7